Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets

BACKGROUND As large genomics and phenotypic datasets are becoming more common, it is increasingly difficult for most researchers to access, manage, and analyze them. One possible approach is to provide the research community with several petabyte-scale cloud-based computing platforms containing these data, along with tools and resources to analyze it. METHODS Bionimbus is an open source cloud...

متن کامل

Analyzing large biological datasets with association networks

Due to advances in high-throughput biotechnologies biological information is being collected in databases at an amazing rate, requiring novel computational approaches that process collected data into new knowledge in a timely manner. In this study, we propose a computational framework for discovering modular structure, relationships and regularities in complex data. The framework utilizes a sem...

متن کامل

Analyzing Large Biological Datasets with an Improved Algorithm for MIC

The computational framework used the traditional similarity measures to find out the significant relationships in biological annotations. But its prerequisites that the biological annotations do not cooccur with each other is particular. To overcome it, in this paper a new method Improved Algorithm for Maximal Information Coefficient (IAMIC) is suggested to discover the hidden regularities betw...

متن کامل

Visualizing and Analyzing Large and Detailed 3d Datasets

This paper presents a set of tools developed to model, visualize and analyze large 3D datasets built from 2D and 3D sensor data. These tools, grouped under the Atelier3D framework, first include a technique for processing and interactively visualizing datasets made of hundreds of millions 3D samples and tens of gigabytes of texture from digital photography. It also includes various analysis too...

متن کامل

Managing large datasets with iRODS - a performance analyses

The integrated Rule Orientated Data System (iRODS)[3] is a Grid data management system that organizes distributed data and their metadata. A Rule Engine allows a flexible definition of data storage, data access and data processing. This paper presents scenarios implemented in a benchmark tool to measure the performance of an iRODS environment as well as results of measurements with large datase...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Journal of the American Medical Informatics Association

سال: 2014

ISSN: 1067-5027,1527-974X

DOI: 10.1136/amiajnl-2013-002155